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January 14th, 2012


You may or may not know it, but Papers relies on the fantastic styles provided by the Citation Style Language (CSL) repository to support formatting of your manuscript in hundreds of different styles (more than 1700 in Papers 2.1.8). Despite this large choice, your favorite journal may not be listed there. The best way to get this repository to grow further and cover more fields of research is to get more people to contribute new styles.

In a post on our support pages we show you how to create your own CSL style. A few of you have been adventurous enough to give it a try and have produced new CSL styles for their own use. We helped a few of you as well in the process, and for the first time in Papers 2.1.8, have added new styles that were the fruit of that labor. But there were only a handful of these, and we know there must be dozens more out there, ready to be added to the list.

To boost the process, and provide more incentives to the CSL creators out there, we have decided to start a new initiative, “A Serial for a Style”. The idea is very simple: if you create a CSL style and contribute it to the CSL style repository, we’ll give you a free Papers2 serial number. That’s one of the way we also want to give back to the CSL community.

Here are the specific rules:

- The style must be new – not a duplicate of an existing style
- Your name and email must be in the author or contributor field of the style – we want you to take full ownership (with great power, comes great responsibility, yada, yada)
- The style must use the Creative Commons Attribution-Share Alike 3.0 License (http://creativecommons.org/licenses/by-sa/3.0/) – Papers2 needs a commercial-friendly license, and that’s also the most popular license in the repository
- The style must contain a URL that links back to instructions to authors, or some other authoritative document
- The style must have been submitted to the official CSL repository – please follow the [instructions on the CSL wiki](https://github.com/citation-style-language/styles/wiki), as we want you to make it as easy as possible to the CSL folks that maintain the repository. This means among other things that the style needs to be written in valid CSL version 1.0.
- 1 serial maximum awarded per style – thus, only one contributor per style will get the serial

We also recognize some of you might want to contribute more than one style. We also want to encourage that, but we have to be reasonable in the number of serials we can give away, so here is the rule we will apply:

-1 style –> 1 serial
- 5 styles –> 2 serials
- 10 styles –> 3 serials
- 15 styles –> 4 serials
- …_etc_… with each additional 5 styles corresponding to one additional serial

The above rules are informal, not a binding contract. We just make here a promise that we will award the serials based on contributions to the CSL repository. You just have to trust we will honor our promise. In return, please do not abuse the system and the rules. Finally, note that we don’t know yet for how long we will run this initiative: it might be limited in time.

December 22nd, 2011

From everyone at Mekentosj we would like to wish you a very Happy Holiday Season and a wonderful and productive new year!

To help along with some of your New Year’s resolutions, we are giving you a little gift for the Holidays: a discount on Papers for iPhone and iPad.

Whether Santa brought your an iPhone or iPad this Christmas or you already had one, there is no better time to get Papers for iOS. It is on sale now in the App store for $9.99 (reg. price $14.99).

With the new Papers 2.1 for Mac update, you can now sync annotations and highlights between your iPad and iPhone with your Mac. You never need to go anywhere without your library; whether you are at a conference or in a meeting, when you want to access information in a paper or share a publication with your peers, your articles are at your fingertips. Read and take notes anywhere: on the road, on the couch, or at a conference on your mobile device, and sync them with your computer later. Papers for iOS is not only a great App to organize your library, with highlighting and annotation support it is a phenomenal reader. Expand on your knowledge by searching databases right inside the app, and download articles directly to your Papers library on your device. You can use Papers for iOS as a stand alone app, or if you are also using Papers on your Mac you can keep your libraries in sync.

Papers for iOS is on sale in the iTunes App store from today until Dec 26th only! Get yourself a copy, and a great start to a productive 2012.

From all of us at Mekentosj, thank you for using Papers, and Happy New Year!

~ The Mekentosj Team


December 16th, 2011

Papers Xmas gift
It’s the time of the year when we start thinking about stocking stuffers and silly reindeer sweaters. While whipping up some holiday cheer this month, consider giving a family member or friend a Papers2 license for Christmas. Papers2 compliments New Years resolutions to finally put some order in anyone’s research library.

A Papers2 serial can also be a gentle hint to your office-mate that it is time to start the new year with a more organized desk, especially if you are confronted with a scene like the one on the right.

There are several advantages to giving someone a Papers2 license as a gift this Christmas; aside from giving award winning software, you don’t need to wrap anything. When we send you your gift-serial we will include a digital postcard you can pass on to your friend, to make it ‘gift-like’.

Papers2 is the gift that keeps on giving, with a more organized research library, the power of annotations, and Magic Manuscripts and Citations. Now that you will both be using Papers, you can also collaborate more easily using Papers Livfe.

Papers recognizes over 85 different document types, which means you can take your library beyond your research life. Organize your recipes, music scores, or knitting patterns. Highlight and annotate your articles in multiple colors, and take your library mobile by syncing to iPad and iPhone. Insert citations into your manuscripts effortlessly, and change the citation style with the click of a button if you are submitting to different journal than anticipated. Papers gives you the freedom to focus on what matters to you, by everything else involved with organizing, reading, writing, and citing a whole lot easier than it has ever been.

If you are already using and loving Papers2, why not share the love and gift Papers as a Christmas present this year? You can do so by following this link.

December 2nd, 2011

We are looking for a new addition to our dynamic team! If you love Papers and have kick-ass web development skills, we’d love to work with you.

The Mekentosj team is a group of passionate people who are, despite the fact we don’t work in a central office or even in the same country, a tight-knit bunch. Each of us is very unique, but we share a common passion: creating amazing software for science, and making the Papers experience more awesome.

When we launched Papers2, we also launched Papers Livfe. Now, we are looking for that talented individual who can help us take Livfe to the next level.

If you think you might have what it takes, we look forward to hearing from you! Send us an email at feedback@mekentosj.com from wherever you are, tell us why you want to join us, and tell us three things you’d add into Papers Livfe.

November 30th, 2011

Papers 2.1 release

When we launched Papers2 in March we knew we still had quite a bit of ground to cover. In March you saw the results of two years of hard work by an amazing team of people.

Although Papers2 might have looked familiar, it was built completely from scratch.

The reason for doing this was so we would be able to make Papers even better in the future, laying the groundwork for some awesome features like the new annotation support in Papers 2.1 and many others that are still to come. The downside is that some of the Papers1 features you were used to, did not make it for the release deadline in March.

We could not just move around some code to bring all Papers1 features to Papers2. Because we were working from the ground up, the foundation that had to be build to accommodate some technically challenging features was very different from Papers1. You can’t build a Cadillac on the framework for a Beetle, and we could not create the features we wanted on top of the Papers1 foundation.

Although there were some technical challenges to be overcome, we promised it was just a matter of time before we brought back all the Papers1 features to Papers2. We knew the blue search tokens were sorely missed, and when we build unified search we also had to do some more work to bring back the search tokens.

Now, it is time for a new Papers2 experience: Papers 2.1

If you were waiting to switch from Papers1 to Papers2 because you could not imagine your workflow without the blue search tokens, then we’d love to welcome you to a new and improved Papers experience. Searching multiple repositories at once with unified search, and using search tokens to refine your query, guarantees you will find the exact papers you want, faster.

When libraries grow, duplications are a common occurrence. We made it easy to bring organization to your library with author merging in Papers1, and now this feature is back again in Papers2.1. Some Papers1 features are still missing, such as journal merging, papers archives, and recent papers for authors and journals. These are still on their way, and will make their Papers2 debut in Papers2.2. You can stay on top of what is coming next on our roadmap.

Aside from bringing familiar features back, we have worked on expanding the number of features in Papers2.

Annotation support was high on the wish list. If it was on your wish list as well, then Santa came early this year because we’ve made annotations a reality for Papers2.1. Not only can you highlight (in different colors!) and add notes anywhere in the text, but your annotations sync with Papers for iPad and iPhone. We believe highlighting and annotating in Papers should be faster than grabbing a highlighter and taking it to a printed article. That is why any text you select with your mouse while holding the command key is automatically highlighted. You can, but do not have to, right-click to select the “highlight” option. Equally simple is note taking: hold the command key and double click anywhere in the article to add a note.

We could go on and on about all the great features we have brought back, and the new ones we have created, but instead we would like to invite you to testdrive them yourself. Download a free 30-day trial of Papers 2.1.

Enjoy Papers2.1!
the mekentosj team

July 20th, 2011

Academia can be a treacherous environment, but the promise of unexpected discoveries and groundbreaking research make it only ever more exciting.

Usually we know where we can expect complications to come from; contaminated samples, unexpectedly fast grant-proposal deadline, or uncooperative university administrators. However, sometimes the most shocking dangers surface from unexpected places. One such place can be the weight and magnitude of our library. Yes, knowledge does get heavy, and at times too heavy for office furniture.

Here is a picture of one prominent researcher’s desk as he encountered it one fine morning this week, collapsed under the weight of his library of articles.

Pre-Papers2 Chaos and desctruction

Pre-Papers2 chaos & destruction

Of course the obvious solution was a Papers2 makeover. Now, office furniture remains in tact, notes can be searched and found within seconds, the library can be shared with colleagues across the hall, and organization prevails.

The Papers2 makeover 'after' picture

The Papers2 makeover 'after' picture

July 17th, 2011

Note: the promotion week has now ended

To celebrate the 10th anniversary of Mekentosj you can buy Papers for iOS for half the price this week from the iTunes app store!

Party

Who could have ever figured where some simple brainstorming over a drink on my birthday, now exactly 10 years ago, could all lead to. The following day, July 16th 2001, Tom and I went ahead and officially registered the mekentosj.com domain name. The names Mek and Tosj had become our nicknames in the lab thanks to our boss at the time. As we had a beer on my birthday we came up with the idea of making a website about the eccentric people in the lab we had joined as undergraduate students, a website mainly aimed at the other members of the lab and the institute. It had a page called Chris’ coffee corner after one of the technicians in the lab, a page with the latest lab gossips, and the schedule for the upcoming movie nights we organized (including fake movie trailers featuring other lab members, yes we knew how to fill up our spare time :-)

That summer I had also picked up a programming book and started playing with the free developer tools that came with the brand new Mac OS X that Apple had just released. This led to the first Mekentosj branded app called LabAssistant, a simple egg-timer app to keep track of experiments in the lab. To publish it on our student website was an obvious next step (it is still available to date), and started something we could have never envisioned. The excitement and addiction of getting feedback and enthusiastic reactions from real users, from all over the world was something that even today is still the main reason we do this today. And such the adventure begun, as well as a series of scientific Mac apps that quickly took over the center stage and reason for being of mekentosj.com

Tom came up with a logo and we signed up for the first WWDC, more or less just because we could, and wanted to see a Steve Jobs keynote for real. This was not long after we had released 4Peaks, our sequence viewer that had quickly started to become very popular, especially after we won our first Apple Design Award at the WWDC as a complete surprise.

Up till then mekentosj.com was running of one of these free hosting sites that gave you 1Gb of free bandwidth a month, which seemed enormous at the time. But I remember how slowly things had grown to point where we were anxiously staying within the quotum at the end of each month. And when the ADA news came out it was inevitable and we had to pull our creditcards.

Over the next three years, the second ADA for EnzymeX, and of course the launch of Papers for Mac in January 2007, followed by the third ADA in June brought us to a point I could never imagined. In November 2007, mekentosj.com officially became mekentosj BV, an officially incorporated company.

Today the 1Gb monthly limit we started with would last us less than half an hour, and mekentosj has now grown to 7 people on 4 different continents. The past 10 years have been an amazing story with an almost infinite number of great memories and anecdotes. Yet, I feel it’s only the beginning and to see new adventures and chapters being added to that story every day is what is really most exciting. Here’s to all who play part in those stories, and to all our users who we’ve done it for, here’s to the next 10 years for mekentosj!

Alex
16 July 2011

June 27th, 2011

Papers Livfe

The Papers2 release was much anticipated, and without question in great part because of Papers Livfe. With the response to the Papers2 release being even more successful than anticipated, we ran into scaling concerns with Livfe. To ensure all users would have a troublefree experience taking their libraries Livfe, we made the decision to allow access to users in stages, after we made some more adjustments to the system.

Once it became clear we could not open up Livfe right after releasing Papers2, the team worked around the clock to get Livfe ready for the large influx of users. We are thrilled to finally say Livfe is live!

What’s Livfe all about?
If you have not used Livfe yourself yet, you might be wondering what Livfe really is all about. With Papers Livfe, you can create collections of papers you share with colleagues and friends. Collections can also be made public and shared with the world.

Livfe takes collaborations to a whole new level: working on a paper with a colleague across the world? Share a collection of references important for your work. Sharing can also take the shape of journal clubs or study groups, and Livfe is perfect for this as well. Any collection can become a Livfe collection and shared with any other Papers2 user. Through reviews and comments you can share your thoughts about each article with the other members of your collection.

How Livfe helps you share
Using Papers Livfe you share collections, and your personal reviews for the articles in your collection, with other Papers Livfe users. One central question users have been asking us is whether the PDF files associated with your library entries are shared. Unfortunately, there is no way we can share PDF files through Livfe for copyright reasons. What is shared in Livfe is the metadata for all the articles in your Livfe collection. Other members of your collection are lead to the publishers website to import the PDF themselves.

Our Livfe introduction
Livfe speaks for itself, and doesn’t need too much of an introduction, but we’ve created one anyways.
Enjoy Livfe!
the Mekentosj team

Check out our growing Livfe FAQ and upcoming tutorials. Still have questions about Livfe? Make use of our support system to ask us.

We would love to hear how you are using Papers Livfe in the comments

March 8th, 2011

What a ride it has been, from the day we released the first public preview of Papers it was clear where we wanted to go, and today is an important milestone on this journey.

Today we launch Papers2, a project 2 years in the making, in which we poured our heart and soul and gave everything we got. Yes, we; mekentosj has grown into an amazing team of talented people that is just an absolutely joy to work with. We’re spread over 6 locations, we’re all very different, but what we share is a passion for this product and for making an awesome user experience.

Will Papers2 be perfect, absolutely not, will it do everything you have wished for, absolutely not. But you can bet we’ll give it our everything to make it so in the time to come. Above all we hope that despite the glitches, bugs, and missing features, what shows through is that Papers2 represents the next step in this incredible story.

Enjoy Papers2!
the mekentosj team



February 14th, 2011

They say good news never comes alone, and so it is. We’ve just announced the countdown towards the release of Papers2 for Mac, a moment we’ve been working towards for the past two years. But in those two years time hasn’t stood still and our Papers user base has grown tremendously. To the point where it started taking its toll. Having to answer over 30.000 emails a year, keeping track of 20.000 forum posts, releasing 15+ updates, AND having to build the next major version of Papers is not an easy feat.

We figured we needed help. We needed a Papers Genius. What is a Papers Genius you might ask? Well something like this:

Papers Genius

“We’re looking for a talented and enthusiastic new team member who wants to help us improve every imaginable aspect of Papers.
You would help us provide better support, an awesome website, great tutorials, and guide both new and pro Papers users. And you would be key in helping us launch the exciting new features and products we’ve been working on!”

We had no clue what kind of person would respond or whether someone would respond at all. Luckily we were blown away by the reactions, the next day we received an email from Dan Quintana, a PhD student neuroscience at the University of Sydney, Australia. The description we had put up fit him perfectly, Dan’s a big Papers fan and has tons of ideas how to improve the program. Unfortunately he is still in the beginning of his PhD and therefore couldn’t join us full-time. We’re very pleased that he nonetheless has agreed to help us out a number of hours per week as a volunteer. You will soon start to see the first improved Papers for iOS tutorials that Dan has produced.

Almost at the same time as Dan’s email we received one from Christine Buske, a final year PhD student at the University of Toronto, Canada. I don’t think we could have found a more suitable person as our first official Paper Genius! Christine is a self-proclaimed Papers addict and she couldn’t wait to join us in making Papers even better and help us launch Papers2.

Christine’s story is in many ways familiar to that of many of us; although she kind of liked working in the lab she quickly discovered that it was not the thing that kept her up at night. Instead, she has taken on an impressive list of activities outside the lab, including copywriting, producing TV commercials, translating research articles and marketing materials, and creating her own websites.

All those skills will come in perfectly handy in her role as Papers Genius. It will be exciting to see Christine join the team and work with Dan and all of us to improve Papers. Not only do we now have an official Papers Genius on board, Christine will also without doubt add some necessary girl power!